STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4899Sulfatase. (555 aa)    
Predicted Functional Partners:
GLE_4900
Transmembrane protein.
 
   
 0.959
GLE_4162
Aspartyl/asparaginyl beta-hydroxylase family.
     
 0.907
GLE_0359
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
 0.806
GLE_4115
Sulfatase.
 
  
 
0.602
flgF
Flagellar basal-body rod protein.
    
 
 0.586
GLE_4901
Hypothetical protein.
       0.510
GLE_0864
SNARE associated Golgi protein/PAP2 superfamily protein.
    
 0.483
GLE_4903
Sensor histidine kinase.
 
     0.474
yhbN
Cell envelope biogenesis protein YhbN; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm.
  
   
 0.449
GLE_1747
Phosphatidylglycerophosphatase B-related protein.
    
 0.417
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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