Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GLE_4913Response regulator protein. (284 aa)    
Predicted Functional Partners:
GLE_0164
Sensory box histidine kinase.
  
 0.973
pilL
Hpt domain protein; Response regulator receiver domain/histidine kinase-, DNA gyrase B-, and HSP90-like ATPase/CheW-like domain.
 
 0.947
GLE_5310
Sensory box histidine kinase.
 
 
 0.907
GLE_0632
Sensory box histidine kinase.
 
 
 0.895
GLE_3438
Diguanylate cyclase.
  
 
 0.864
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
 
     0.832
GLE_0894
Sensory box protein.
 
 0.806
GLE_1812
Sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase.
 
 0.806
GLE_2223
Sensory box histidine kinase.
 
 
 0.750
morA
PAS domain protein.
 
 0.736
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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