STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4930Ankyrin repeat protein. (1128 aa)    
Predicted Functional Partners:
GLE_4931
Hypothetical protein.
       0.842
GLE_5152
Tetratricopeptide repeat domain protein.
  
 
  0.821
GLE_0865
Serine/threonine protein kinase protein family.
  
 
 0.798
GLE_1684
Membrane protein.
  
     0.767
GLE_1905
Ser/Thr protein phosphatase family protein.
  
 
  0.766
GLE_0800
O-Antigen Polymerase.
  
     0.762
GLE_5167
Phospholipase accessory protein.
  
     0.734
GLE_0026
Hypothetical protein.
   
 0.726
GLE_1598
Calcium-binding EF-hand.
  
 
  0.721
GLE_3908
Histone deacetylase family.
    
 0.715
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.