Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4941Lipoprotein. (107 aa)    
Predicted Functional Partners:
GLE_4343
Hypothetical protein.
  
    0.799
GLE_4732
Hypothetical protein.
  
    0.799
polA-2
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.673
GLE_4942
Acetyltransferase (GNAT) family.
 
     0.605
GLE_4178
General secretion pathway protein I.
  
     0.599
gspL
Fimbrial assembly protein.
  
     0.547
GLE_2241
Regulatory protein.
  
     0.464
GLE_1337
Sporulation and cell division repeat protein.
  
     0.446
GLE_1349
Transcriptional regulator, Fur family; Belongs to the Fur family.
  
     0.426
GLE_3503
Hemolysin.
   
  
 0.422
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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