STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4974Hypothetical protein. (229 aa)    
Predicted Functional Partners:
GLE_4973
Membrane protein.
 
    0.972
GLE_4972
Phosphotransferase family protein.
 
     0.963
GLE_4976
Hypothetical protein.
 
     0.949
GLE_4975
Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase.
 
     0.929
GLE_4971
Short chain dehydrogenase/NAD dependent epimerase/dehydratase family.
 
     0.894
GLE_4254
Outer membrane protein.
    
   0.870
GLE_3167
N-acetylmuramoyl-L-alanine amidase.
    
   0.838
GLE_4978
Hypothetical protein.
 
    0.828
GLE_4979
Pteridine-dependent deoxygenase like protein.
 
     0.812
GLE_4968
Hypothetical protein.
 
     0.796
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.