STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_4984Binding-protein-dependent transport system inner membrane component. (288 aa)    
Predicted Functional Partners:
GLE_0344
ABC transporter, permease protein.
 
 0.999
GLE_4983
ABC transporter, ATP-binding protein.
 
 0.999
GLE_0346
ABC-transport substrate-binding protein.
 
 0.989
GLE_0655
ABC transporter, ATP-binding protein.
 
      0.895
GLE_4209
ABC transporter, ATP-binding protein.
 
 
    0.833
cysA
Sulfate ABC transporter, ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
      0.807
ftsE
Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.
 
      0.726
GLE_3932
ABC transporter, ATP-binding protein.
 
      0.674
GLE_4463
ABC transporter, ATP-binding protein.
 
      0.511
GLE_4985
Transcriptional regulator, Rrf2 family.
       0.486
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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