Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_5019 | GLE_5020 | GLE_5019 | GLE_5020 | Hypothetical protein. | Pyridoxal-phosphate dependent enzyme. | 0.974 |
GLE_5019 | GLE_5021 | GLE_5019 | GLE_5021 | Hypothetical protein. | GHMP kinases putative ATP-binding protein. | 0.749 |
GLE_5019 | GLE_5022 | GLE_5019 | GLE_5022 | Hypothetical protein. | TonB-dependent receptor. | 0.641 |
GLE_5019 | GLE_5023 | GLE_5019 | GLE_5023 | Hypothetical protein. | Membrane protein. | 0.641 |
GLE_5019 | GLE_5024 | GLE_5019 | GLE_5024 | Hypothetical protein. | Membrane protein. | 0.641 |
GLE_5019 | GLE_5025 | GLE_5019 | GLE_5025 | Hypothetical protein. | ABC transporter, ATP-binding protein. | 0.641 |
GLE_5019 | GLE_5026 | GLE_5019 | GLE_5026 | Hypothetical protein. | TonB-dependent siderophore receptor. | 0.641 |
GLE_5019 | cysK | GLE_5019 | GLE_0989 | Hypothetical protein. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.815 |
GLE_5019 | cysK-2 | GLE_5019 | GLE_1229 | Hypothetical protein. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.874 |
GLE_5020 | GLE_5019 | GLE_5020 | GLE_5019 | Pyridoxal-phosphate dependent enzyme. | Hypothetical protein. | 0.974 |
GLE_5020 | GLE_5021 | GLE_5020 | GLE_5021 | Pyridoxal-phosphate dependent enzyme. | GHMP kinases putative ATP-binding protein. | 0.890 |
GLE_5020 | GLE_5022 | GLE_5020 | GLE_5022 | Pyridoxal-phosphate dependent enzyme. | TonB-dependent receptor. | 0.710 |
GLE_5020 | GLE_5023 | GLE_5020 | GLE_5023 | Pyridoxal-phosphate dependent enzyme. | Membrane protein. | 0.709 |
GLE_5020 | GLE_5024 | GLE_5020 | GLE_5024 | Pyridoxal-phosphate dependent enzyme. | Membrane protein. | 0.709 |
GLE_5020 | GLE_5025 | GLE_5020 | GLE_5025 | Pyridoxal-phosphate dependent enzyme. | ABC transporter, ATP-binding protein. | 0.709 |
GLE_5020 | GLE_5026 | GLE_5020 | GLE_5026 | Pyridoxal-phosphate dependent enzyme. | TonB-dependent siderophore receptor. | 0.709 |
GLE_5020 | cysK | GLE_5020 | GLE_0989 | Pyridoxal-phosphate dependent enzyme. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.723 |
GLE_5020 | cysK-2 | GLE_5020 | GLE_1229 | Pyridoxal-phosphate dependent enzyme. | Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.728 |
GLE_5020 | cysN | GLE_5020 | GLE_1238 | Pyridoxal-phosphate dependent enzyme. | Bifunctional enzyme CysN/cysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.873 |
GLE_5021 | GLE_5019 | GLE_5021 | GLE_5019 | GHMP kinases putative ATP-binding protein. | Hypothetical protein. | 0.749 |
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