STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_5037hemY-like protein. (416 aa)    
Predicted Functional Partners:
cysG
Putative uroporphyrin-III C-methyltransferase.
 
  
 0.920
hemD
uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.
 
   
 0.783
GLE_4533
Hypothetical protein.
 
    0.751
GLE_4143
Lipoprotein, LppC family.
  
     0.663
GLE_1684
Membrane protein.
  
     0.641
GLE_1221
Hypothetical protein.
  
     0.608
GLE_0800
O-Antigen Polymerase.
  
     0.601
GLE_0864
SNARE associated Golgi protein/PAP2 superfamily protein.
  
     0.585
GLE_4556
TonB family domain protein.
  
     0.575
GLE_0291
Hypothetical protein.
  
     0.570
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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