Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_3352 | GLE_3833 | GLE_3352 | GLE_3833 | Asparagine synthase. | Hypothetical protein. | 0.959 |
GLE_3352 | GLE_5061 | GLE_3352 | GLE_5061 | Asparagine synthase. | L-asparagineamidohydrolase precursor. | 0.905 |
GLE_3352 | asnB | GLE_3352 | GLE_1791 | Asparagine synthase. | Asparagine synthase. | 0.730 |
GLE_3352 | asnB-2 | GLE_3352 | GLE_3051 | Asparagine synthase. | Asparagine synthase. | 0.725 |
GLE_3352 | lysA | GLE_3352 | GLE_3732 | Asparagine synthase. | Aspartate kinase/diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.824 |
GLE_3352 | purA | GLE_3352 | GLE_1516 | Asparagine synthase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.914 |
GLE_3833 | GLE_3352 | GLE_3833 | GLE_3352 | Hypothetical protein. | Asparagine synthase. | 0.959 |
GLE_3833 | GLE_5061 | GLE_3833 | GLE_5061 | Hypothetical protein. | L-asparagineamidohydrolase precursor. | 0.912 |
GLE_3833 | asnB | GLE_3833 | GLE_1791 | Hypothetical protein. | Asparagine synthase. | 0.840 |
GLE_3833 | asnB-2 | GLE_3833 | GLE_3051 | Hypothetical protein. | Asparagine synthase. | 0.840 |
GLE_3833 | lysA | GLE_3833 | GLE_3732 | Hypothetical protein. | Aspartate kinase/diaminopimelate decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. | 0.765 |
GLE_4983 | GLE_5061 | GLE_4983 | GLE_5061 | ABC transporter, ATP-binding protein. | L-asparagineamidohydrolase precursor. | 0.717 |
GLE_4983 | cysN | GLE_4983 | GLE_1238 | ABC transporter, ATP-binding protein. | Bifunctional enzyme CysN/cysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.508 |
GLE_5060 | GLE_5061 | GLE_5060 | GLE_5061 | Putative cyanophycinase; Belongs to the peptidase S51 family. | L-asparagineamidohydrolase precursor. | 0.989 |
GLE_5061 | GLE_3352 | GLE_5061 | GLE_3352 | L-asparagineamidohydrolase precursor. | Asparagine synthase. | 0.905 |
GLE_5061 | GLE_3833 | GLE_5061 | GLE_3833 | L-asparagineamidohydrolase precursor. | Hypothetical protein. | 0.912 |
GLE_5061 | GLE_4983 | GLE_5061 | GLE_4983 | L-asparagineamidohydrolase precursor. | ABC transporter, ATP-binding protein. | 0.717 |
GLE_5061 | GLE_5060 | GLE_5061 | GLE_5060 | L-asparagineamidohydrolase precursor. | Putative cyanophycinase; Belongs to the peptidase S51 family. | 0.989 |
GLE_5061 | asnB | GLE_5061 | GLE_1791 | L-asparagineamidohydrolase precursor. | Asparagine synthase. | 0.627 |
GLE_5061 | asnB-2 | GLE_5061 | GLE_3051 | L-asparagineamidohydrolase precursor. | Asparagine synthase. | 0.627 |
page 1 of 3