STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sctNATPase FliI/YscN family. (481 aa)    
Predicted Functional Partners:
sctL
Type III secretion apparatus protein.
  
 
 0.997
fliF
Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.991
fliP
Flagellar biosynthetic protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.985
flgC
Flagellar basal-body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.983
fliN
Flagellar motor switch protein.
 
 
 0.979
sctJ
Type III secretion apparatus lipoprotein.
 
  
 0.976
fliQ
Flagellar biosynthetic protein.
 
  
 0.975
fliR
Flagellar biosynthetic protein.
 
  
 0.973
flhB
Flagellar biosynthetic protein.
 
 
 0.968
GLE_5123
Type III secretion protein, flhB like.
 
 
 0.968
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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