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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_5129Glycosyl hydrolase, family 3. (862 aa)    
Predicted Functional Partners:
GLE_3654
Glycosyl hydrolase, family 31.
 
  
 0.900
GLE_2523
Beta-glucosidase.
  
  
 
0.899
GLE_3663
Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
 0.880
GLE_0338
Alpha,alpha-phosphotrehalase.
     
 0.865
gluC
Beta glucanase C.
  
 0.825
GLE_5131
Transcriptional regulator, lacI family.
 
  
  0.763
GLE_3666
TonB-dependent outer membrane receptor.
  
     0.738
GLE_3664
Pass1-related protein.
  
     0.728
gluA
Beta glucanase A.
  
  
  0.722
GLE_0343
Transcriptional regulator, LacI family.
  
  
  0.649
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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