Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0338 | GLE_0343 | GLE_0338 | GLE_0343 | Alpha,alpha-phosphotrehalase. | Transcriptional regulator, LacI family. | 0.654 |
GLE_0338 | GLE_2523 | GLE_0338 | GLE_2523 | Alpha,alpha-phosphotrehalase. | Beta-glucosidase. | 0.891 |
GLE_0338 | GLE_3654 | GLE_0338 | GLE_3654 | Alpha,alpha-phosphotrehalase. | Glycosyl hydrolase, family 31. | 0.921 |
GLE_0338 | GLE_5129 | GLE_0338 | GLE_5129 | Alpha,alpha-phosphotrehalase. | Glycosyl hydrolase, family 3. | 0.891 |
GLE_0338 | GLE_5131 | GLE_0338 | GLE_5131 | Alpha,alpha-phosphotrehalase. | Transcriptional regulator, lacI family. | 0.402 |
GLE_0343 | GLE_0338 | GLE_0343 | GLE_0338 | Transcriptional regulator, LacI family. | Alpha,alpha-phosphotrehalase. | 0.654 |
GLE_0343 | GLE_3664 | GLE_0343 | GLE_3664 | Transcriptional regulator, LacI family. | Pass1-related protein. | 0.649 |
GLE_0343 | GLE_3666 | GLE_0343 | GLE_3666 | Transcriptional regulator, LacI family. | TonB-dependent outer membrane receptor. | 0.666 |
GLE_0343 | GLE_5129 | GLE_0343 | GLE_5129 | Transcriptional regulator, LacI family. | Glycosyl hydrolase, family 3. | 0.656 |
GLE_2523 | GLE_0338 | GLE_2523 | GLE_0338 | Beta-glucosidase. | Alpha,alpha-phosphotrehalase. | 0.891 |
GLE_2523 | GLE_3654 | GLE_2523 | GLE_3654 | Beta-glucosidase. | Glycosyl hydrolase, family 31. | 0.922 |
GLE_2523 | GLE_3663 | GLE_2523 | GLE_3663 | Beta-glucosidase. | Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.576 |
GLE_2523 | GLE_5129 | GLE_2523 | GLE_5129 | Beta-glucosidase. | Glycosyl hydrolase, family 3. | 0.917 |
GLE_2523 | gluA | GLE_2523 | GLE_2518 | Beta-glucosidase. | Beta glucanase A. | 0.713 |
GLE_2523 | gluC | GLE_2523 | GLE_0490 | Beta-glucosidase. | Beta glucanase C. | 0.798 |
GLE_3654 | GLE_0338 | GLE_3654 | GLE_0338 | Glycosyl hydrolase, family 31. | Alpha,alpha-phosphotrehalase. | 0.921 |
GLE_3654 | GLE_2523 | GLE_3654 | GLE_2523 | Glycosyl hydrolase, family 31. | Beta-glucosidase. | 0.922 |
GLE_3654 | GLE_3663 | GLE_3654 | GLE_3663 | Glycosyl hydrolase, family 31. | Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.436 |
GLE_3654 | GLE_5129 | GLE_3654 | GLE_5129 | Glycosyl hydrolase, family 31. | Glycosyl hydrolase, family 3. | 0.919 |
GLE_3663 | GLE_2523 | GLE_3663 | GLE_2523 | Cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Beta-glucosidase. | 0.576 |
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