Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
amtAmmonium transporter. (466 aa)    
Predicted Functional Partners:
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 0.999
glnB-2
Nitrogen regulatory protein P-II.
 0.999
ntrB
Nitrogen regulation protein NtrB.
  
 
 0.826
gltB
Glutamine amidotransferases class-II/glutamate synthase.
 
  
 0.809
GLE_1812
Sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase.
      0.770
glnA
Glutamine synthetase, type I.
  
  
 0.708
GLE_0164
Sensory box histidine kinase.
   
 0.678
GLE_1739
Sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase.
 
   
  0.676
GLE_5140
Hypothetical protein.
  
    0.630
GLE_2824
Aminotransferase class I and II.
     
 0.621
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.