STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_5156Glucose/galactose transporter. (439 aa)    
Predicted Functional Partners:
GLE_0378
Alpha-1,2-mannosidase, putative.
 
     0.611
GLE_5157
Hypothetical protein.
       0.563
GLE_5195
Transcriptional regulator, GntR family.
 
   
 0.511
GLE_3683
Dihydrodipicolinate synthetase family; Belongs to the DapA family.
  
  
 0.506
GLE_4608
Dihydrodipicolinate synthetase family; Belongs to the DapA family.
  
  
 0.506
GLE_5161
Beta-hexosaminidase.
 
     0.499
sglT
Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.488
GLE_5196
SIS domain protein.
     
 0.477
GLE_5188
Transcriptional regulator, LacI family.
 
     0.473
GLE_0341
Transporter, major facilitator family.
 
    0.462
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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