Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_5156Glucose/galactose transporter. (439 aa)    
Predicted Functional Partners:
GLE_0378
Alpha-1,2-mannosidase, putative.
 
     0.611
GLE_5157
Hypothetical protein.
       0.563
GLE_5161
Beta-hexosaminidase.
 
     0.497
sglT
Sodium/glucose cotransporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.488
GLE_5188
Transcriptional regulator, LacI family.
 
     0.465
GLE_0341
Transporter, major facilitator family.
 
    0.456
GLE_2270
Alpha-1,2-mannosidase, putative.
 
     0.426
GLE_3664
Pass1-related protein.
  
     0.416
GLE_5160
TonB-dependent receptor.
 
     0.408
GLE_0343
Transcriptional regulator, LacI family.
  
     0.405
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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