Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0534 | GLE_1880 | GLE_0534 | GLE_1880 | Acyltransferase family. | Hypothetical protein. | 0.439 |
GLE_0534 | tetR | GLE_0534 | GLE_5173 | Acyltransferase family. | Tetracyclin repressor. | 0.403 |
GLE_1880 | GLE_0534 | GLE_1880 | GLE_0534 | Hypothetical protein. | Acyltransferase family. | 0.439 |
GLE_1880 | tetR | GLE_1880 | GLE_5173 | Hypothetical protein. | Tetracyclin repressor. | 0.486 |
GLE_2954 | tetR | GLE_2954 | GLE_5173 | Hydrolase, alpha/beta fold family. | Tetracyclin repressor. | 0.449 |
GLE_5172 | tetR | GLE_5172 | GLE_5173 | Tetracycline resistance protein, class A (TetA(A)). | Tetracyclin repressor. | 0.654 |
tetR | GLE_0534 | GLE_5173 | GLE_0534 | Tetracyclin repressor. | Acyltransferase family. | 0.403 |
tetR | GLE_1880 | GLE_5173 | GLE_1880 | Tetracyclin repressor. | Hypothetical protein. | 0.486 |
tetR | GLE_2954 | GLE_5173 | GLE_2954 | Tetracyclin repressor. | Hydrolase, alpha/beta fold family. | 0.449 |
tetR | GLE_5172 | GLE_5173 | GLE_5172 | Tetracyclin repressor. | Tetracycline resistance protein, class A (TetA(A)). | 0.654 |