Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_5179CobQ/CobB/MinD/ParA nucleotide binding domain. (209 aa)    
Predicted Functional Partners:
GLE_0176
ParB chromosome partitioning protein; Belongs to the ParB family.
  
 
 0.686
GLE_1453
ParB chromosome partitioning protein.
  
 
 0.675
GLE_5182
Phospholipase D Active site motif.
 
     0.648
dam
Site-specific DNA-methyltransferase; Belongs to the N(4)/N(6)-methyltransferase family.
  
 
 0.646
sixA
Phosphohistidine phosphatase SixA.
       0.635
GLE_5181
YceI like family; Belongs to the UPF0312 family.
       0.635
GLE_4029
Glycosyltransferase family 36.
  
 
 0.551
GLE_1452
RepB plasmid partitioning protein.
  
 
 0.538
pgaC
Glycosyl transferase, group 2 family protein.
  
 
 0.534
GLE_1876
Glycosyl transferase, group 2 family protein.
  
 
 0.534
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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