Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0338 | GLE_0865 | GLE_0338 | GLE_0865 | Alpha,alpha-phosphotrehalase. | Serine/threonine protein kinase protein family. | 0.434 |
GLE_0338 | GLE_5296 | GLE_0338 | GLE_5296 | Alpha,alpha-phosphotrehalase. | Amino acid permease. | 0.720 |
GLE_0338 | amyA | GLE_0338 | GLE_0342 | Alpha,alpha-phosphotrehalase. | Cyclomaltodextrin glucanotransferase. | 0.724 |
GLE_0865 | GLE_0338 | GLE_0865 | GLE_0338 | Serine/threonine protein kinase protein family. | Alpha,alpha-phosphotrehalase. | 0.434 |
GLE_0865 | GLE_5296 | GLE_0865 | GLE_5296 | Serine/threonine protein kinase protein family. | Amino acid permease. | 0.591 |
GLE_0865 | amyA | GLE_0865 | GLE_0342 | Serine/threonine protein kinase protein family. | Cyclomaltodextrin glucanotransferase. | 0.434 |
GLE_5296 | GLE_0338 | GLE_5296 | GLE_0338 | Amino acid permease. | Alpha,alpha-phosphotrehalase. | 0.720 |
GLE_5296 | GLE_0865 | GLE_5296 | GLE_0865 | Amino acid permease. | Serine/threonine protein kinase protein family. | 0.591 |
GLE_5296 | GLE_5299 | GLE_5296 | GLE_5299 | Amino acid permease. | Hypothetical protein. | 0.443 |
GLE_5296 | GLE_5300 | GLE_5296 | GLE_5300 | Amino acid permease. | FAD binding domain/FAD dependent oxidoreductase. | 0.443 |
GLE_5296 | GLE_5301 | GLE_5296 | GLE_5301 | Amino acid permease. | Metallo-beta-lactamase domain protein. | 0.443 |
GLE_5296 | amyA | GLE_5296 | GLE_0342 | Amino acid permease. | Cyclomaltodextrin glucanotransferase. | 0.720 |
GLE_5296 | fahA | GLE_5296 | GLE_5297 | Amino acid permease. | Fumarylacetoacetase. | 0.443 |
GLE_5296 | hmgA-2 | GLE_5296 | GLE_5298 | Amino acid permease. | Homogentisate 1,2-dioxygenase; Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate. | 0.443 |
GLE_5296 | nadE | GLE_5296 | GLE_4106 | Amino acid permease. | Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.543 |
GLE_5296 | pheA | GLE_5296 | GLE_2983 | Amino acid permease. | Chorismate mutase/prephenate dehydratase/ACT domain. | 0.415 |
GLE_5299 | GLE_5296 | GLE_5299 | GLE_5296 | Hypothetical protein. | Amino acid permease. | 0.443 |
GLE_5299 | GLE_5300 | GLE_5299 | GLE_5300 | Hypothetical protein. | FAD binding domain/FAD dependent oxidoreductase. | 0.950 |
GLE_5299 | GLE_5301 | GLE_5299 | GLE_5301 | Hypothetical protein. | Metallo-beta-lactamase domain protein. | 0.951 |
GLE_5299 | fahA | GLE_5299 | GLE_5297 | Hypothetical protein. | Fumarylacetoacetase. | 0.856 |
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