STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_5427Cytochrome C5. (171 aa)    
Predicted Functional Partners:
GLE_0294
Cytochrome oxidase assembly protein.
 
  
  0.760
cycA
Cytochrome C4.
 
  
 0.732
GLE_0790
Multicopper oxidase.
    
   0.728
copA
Copper resistance protein A.
    
   0.728
cueO
Blue copper oxidase CueO.
    
   0.728
GLE_4164
Membrane protein.
    
   0.703
GLE_3599
Cytochrome C1 family protein.
 
  
 0.672
GLE_2939
Cytochrome C family protein.
 
  
 0.618
petA
Ubiquinol-cytochrome c reductase, iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
 
 0.608
GLE_2940
Cytochrome C family protein.
 
  
 0.569
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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