A0A182Q6T6 protein (Anopheles farauti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182Q6T6

BTB domain-containing protein. (612 aa)

Predicted Functional Partners:

A0A182QAK3

0.883

A0A182R058

0.864

A0A182QR29

0.804

A0A182QBY3

0.741

A0A182R137

0.686

A0A182QSE5

0.684

A0A182R054

0.684

A0A182QP92

0.672

A0A182Q2M3

0.667

A0A182QE55

0.665

Your Current Organism:

Anopheles farauti

NCBI taxonomy Id: 69004
Other names: A. farauti, Anopheles farauti 1, Anopheles farauti No.1, Anopheles farauti sensu stricto

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182Q2M3	A0A182Q6T6	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	BTB domain-containing protein.	0.667
A0A182Q2M3	A0A182QAK3	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	HTH psq-type domain-containing protein.	0.667
A0A182Q2M3	A0A182QE55	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.999
A0A182Q6T6	A0A182Q2M3	BTB domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.667
A0A182Q6T6	A0A182QAK3	BTB domain-containing protein.	HTH psq-type domain-containing protein.	0.883
A0A182Q6T6	A0A182QBY3	BTB domain-containing protein.	TPR_REGION domain-containing protein.	0.741
A0A182Q6T6	A0A182QE55	BTB domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.665
A0A182Q6T6	A0A182QP92	BTB domain-containing protein.	Histone-lysine N-methyltransferase.	0.672
A0A182Q6T6	A0A182QR29	BTB domain-containing protein.	Uncharacterized protein.	0.804
A0A182Q6T6	A0A182QSE5	BTB domain-containing protein.	Uncharacterized protein.	0.684
A0A182Q6T6	A0A182R054	BTB domain-containing protein.	B30.2/SPRY domain-containing protein.	0.684
A0A182Q6T6	A0A182R058	BTB domain-containing protein.	Uncharacterized protein.	0.864
A0A182Q6T6	A0A182R137	BTB domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.686
A0A182QAK3	A0A182Q2M3	HTH psq-type domain-containing protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.667
A0A182QAK3	A0A182Q6T6	HTH psq-type domain-containing protein.	BTB domain-containing protein.	0.883
A0A182QAK3	A0A182QBY3	HTH psq-type domain-containing protein.	TPR_REGION domain-containing protein.	0.741
A0A182QAK3	A0A182QE55	HTH psq-type domain-containing protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.665
A0A182QAK3	A0A182QP92	HTH psq-type domain-containing protein.	Histone-lysine N-methyltransferase.	0.672
A0A182QAK3	A0A182QR29	HTH psq-type domain-containing protein.	Uncharacterized protein.	0.804
A0A182QAK3	A0A182QSE5	HTH psq-type domain-containing protein.	Uncharacterized protein.	0.684