A0A182QCH5 protein (Anopheles farauti) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A182QCH5

DHHC domain-containing protein. (1104 aa)

Predicted Functional Partners:

A0A182QIX7

0.760

A0A182QP85

0.658

A0A182QW00

0.648

A0A182QKZ8

0.633

A0A182QAD3

0.632

A0A182QFF3

0.632

A0A182QRH8

0.632

A0A182QWK1

0.630

A0A182Q198

0.559

A0A182Q5B0

0.559

Your Current Organism:

Anopheles farauti

NCBI taxonomy Id: 69004
Other names: A. farauti, Anopheles farauti 1, Anopheles farauti No.1, Anopheles farauti sensu stricto

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A182Q198	A0A182QAD3	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A182Q198	A0A182QCH5	Uncharacterized protein.	DHHC domain-containing protein.	0.559
A0A182Q198	A0A182QFF3	Uncharacterized protein.	Uncharacterized protein.	0.572
A0A182Q198	A0A182QIX7	Uncharacterized protein.	Erf4 domain-containing protein.	0.540
A0A182Q198	A0A182QRH8	Uncharacterized protein.	Uncharacterized protein.	0.587
A0A182Q5B0	A0A182QCH5	Uncharacterized protein.	DHHC domain-containing protein.	0.559
A0A182Q5B0	A0A182QIX7	Uncharacterized protein.	Erf4 domain-containing protein.	0.540
A0A182QAD3	A0A182Q198	Uncharacterized protein.	Uncharacterized protein.	0.582
A0A182QAD3	A0A182QCH5	Uncharacterized protein.	DHHC domain-containing protein.	0.632
A0A182QAD3	A0A182QIX7	Uncharacterized protein.	Erf4 domain-containing protein.	0.627
A0A182QCH5	A0A182Q198	DHHC domain-containing protein.	Uncharacterized protein.	0.559
A0A182QCH5	A0A182Q5B0	DHHC domain-containing protein.	Uncharacterized protein.	0.559
A0A182QCH5	A0A182QAD3	DHHC domain-containing protein.	Uncharacterized protein.	0.632
A0A182QCH5	A0A182QFF3	DHHC domain-containing protein.	Uncharacterized protein.	0.632
A0A182QCH5	A0A182QIX7	DHHC domain-containing protein.	Erf4 domain-containing protein.	0.760
A0A182QCH5	A0A182QKZ8	DHHC domain-containing protein.	Zinc-hook domain-containing protein.	0.633
A0A182QCH5	A0A182QP85	DHHC domain-containing protein.	ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.	0.658
A0A182QCH5	A0A182QRH8	DHHC domain-containing protein.	Uncharacterized protein.	0.632
A0A182QCH5	A0A182QW00	DHHC domain-containing protein.	FHA domain-containing protein.	0.648
A0A182QCH5	A0A182QWK1	DHHC domain-containing protein.	Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.	0.630