A0A1L9WM01 protein (Aspergillus aculeatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1L9WM01

PHD-type domain-containing protein. (843 aa)

Predicted Functional Partners:

A0A1L9WGY3

0.946

A0A1L9X6S1

0.943

A0A1L9WQ09

0.932

A0A1L9WQA9

0.932

A0A1L9WXB4

0.932

A0A1L9X3Q3

0.928

A0A1L9X3N0

0.905

A0A1L9WH38

0.840

A0A1L9WKR7

0.739

A0A1L9WI66

0.712

Your Current Organism:

Aspergillus aculeatus

NCBI taxonomy Id: 690307
Other names: A. aculeatus ATCC 16872, Aspergillus aculeatus ATCC 16872

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1L9WGY3	A0A1L9WH38	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.917
A0A1L9WGY3	A0A1L9WI66	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.914
A0A1L9WGY3	A0A1L9WKR7	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.768
A0A1L9WGY3	A0A1L9WM01	WD_REPEATS_REGION domain-containing protein.	PHD-type domain-containing protein.	0.946
A0A1L9WGY3	A0A1L9WQ09	WD_REPEATS_REGION domain-containing protein.	FAS1 domain-containing protein.	0.951
A0A1L9WGY3	A0A1L9WQA9	WD_REPEATS_REGION domain-containing protein.	HDAC_interact domain-containing protein.	0.951
A0A1L9WGY3	A0A1L9WXB4	WD_REPEATS_REGION domain-containing protein.	PAPA-1 domain-containing protein.	0.977
A0A1L9WGY3	A0A1L9X3N0	WD_REPEATS_REGION domain-containing protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.975
A0A1L9WGY3	A0A1L9X3Q3	WD_REPEATS_REGION domain-containing protein.	Hist_deacetyl domain-containing protein.	0.975
A0A1L9WGY3	A0A1L9X6S1	WD_REPEATS_REGION domain-containing protein.	MRG domain-containing protein.	0.977
A0A1L9WH38	A0A1L9WGY3	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.917
A0A1L9WH38	A0A1L9WI66	Uncharacterized protein.	Uncharacterized protein.	0.400
A0A1L9WH38	A0A1L9WKR7	Uncharacterized protein.	Uncharacterized protein; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. SET2 subfamily.	0.704
A0A1L9WH38	A0A1L9WM01	Uncharacterized protein.	PHD-type domain-containing protein.	0.840
A0A1L9WH38	A0A1L9WQ09	Uncharacterized protein.	FAS1 domain-containing protein.	0.768
A0A1L9WH38	A0A1L9WQA9	Uncharacterized protein.	HDAC_interact domain-containing protein.	0.768
A0A1L9WH38	A0A1L9WXB4	Uncharacterized protein.	PAPA-1 domain-containing protein.	0.710
A0A1L9WH38	A0A1L9X3N0	Uncharacterized protein.	Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.	0.684
A0A1L9WH38	A0A1L9X3Q3	Uncharacterized protein.	Hist_deacetyl domain-containing protein.	0.684
A0A1L9WH38	A0A1L9X6S1	Uncharacterized protein.	MRG domain-containing protein.	0.710