STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IC63_06235Glycoside hydrolase family 24; Derived by automated computational analysis using gene prediction method: Protein Homology. (208 aa)    
Predicted Functional Partners:
IC63_14810
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.982
IC63_06280
Gene transfer agent (GTA); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.972
IC63_14365
Gene transfer agent (GTA); Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.964
IC63_06270
Beta tubulin, autoregulation binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.959
IC63_14375
Beta tubulin, autoregulation binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.947
IC63_14785
Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.947
IC63_14825
Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.942
IC63_14815
Gene transfer agent protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.929
IC63_14845
Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.908
IC63_14820
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
   0.906
Your Current Organism:
Paracoccus sphaerophysae
NCBI taxonomy Id: 690417
Other names: ACCC 05413, HAMBI 3106, P. sphaerophysae, Paracoccus sp. Zy-3, Paracoccus sphaerophysae Deng et al. 2011, strain Zy-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.