STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG49808.1NADPH-dependent F420 reductase; KEGG: swi:Swit_0718 reduced coenzyme F420:NADP oxidoreductase; TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent. (219 aa)    
Predicted Functional Partners:
AEG49809.1
Protein of unknown function DUF129; PFAM: F420-0:gamma-glutamyl ligase-related; KEGG: rpb:RPB_4408 hypothetical protein.
 
   
 0.948
AEG49864.1
TIGRFAM: LPPG:Fo 2-phospho-L-lactate transferase; HAMAP: LPPG:FO 2-phospho-L-lactate transferase; KEGG: sno:Snov_4232 LPPG domain protein containing protein; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052.
 
   
 0.790
AEG49863.1
KEGG: sno:Snov_4233 F420-dependent oxidoreductase; TIGRFAM: F420-0:gamma-glutamyl ligase; PFAM: F420-0:gamma-glutamyl ligase-related.
 
   
 0.787
AEG49799.1
FO synthase subunit 1; SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Complex F420, CofH; FO synthase, subunit 1; FO synthase, subunit 2; KEGG: pzu:PHZ_c2536 FO synthase; HAMAP: FO synthase subunit 1; PFAM: Radical SAM; Biotin/thiamin synthesis-associated protein.
 
   
 0.768
AEG48305.1
FO synthase subunit 1; SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Complex F420, CofH; FO synthase, subunit 1; FO synthase, subunit 2; KEGG: eba:p2A350 FO synthase; HAMAP: FO synthase subunit 1; PFAM: Radical SAM.
 
   
 0.764
AEG49865.1
2-phospho-L-lactate guanylyltransferase CofC; KEGG: rxy:Rxyl_0959 hypothetical protein; TIGRFAM: Coenzyme F420, CofC; PFAM: Coenzyme F420, CofC.
 
   
 0.755
AEG49565.1
Putative F420-dependent oxidoreductase, MSMEG_2249 family; KEGG: fal:FRAAL3374 putative coenzyme F420-dependent N(5), N(10)-methylenetetrahydromethanopterin reductase; TIGRFAM: putative F420-dependent oxidoreductase, MSMEG_2249 family; PFAM: Luciferase-like, subgroup.
 
  
 0.665
AEG49798.1
PFAM: Luciferase-like, subgroup; KEGG: srt:Srot_1579 5,10-methylenetetrahydromethanopterin reductase.
 
  
 0.594
AEG49305.1
Band 7 protein; KEGG: sjp:SJA_C1-26900 putative protease; PFAM: Band 7 protein; SMART: Band 7 protein.
    
  0.478
AEG50743.1
HflK protein; HflC and HflK could encode or regulate a protease.
    
  0.478
Your Current Organism:
Sphingobium chlorophenolicum
NCBI taxonomy Id: 690566
Other names: FLAVOBACTERIUM SP. (STRAIN ATCC 39723), Flavobacterium sp. (ATCC 39723), Flavobacterium sp. ATCC 39723, S. chlorophenolicum L-1, Sphingobium chlorophenolicum ATCC 39723, Sphingobium chlorophenolicum L-1, Sphingobium chlorophenolicum str. L-1, Sphingobium chlorophenolicum strain L-1
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