STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG49851.1LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: sjp:SJA_C1-34830 LmbE-like protein. (227 aa)    
Predicted Functional Partners:
AEG49850.1
KEGG: sjp:SJA_C1-34820 putative methionyl-tRNA formyltransferase; PFAM: Formyl transferase, C-terminal; Formyl transferase, N-terminal.
 
  
 0.884
AEG49848.1
PFAM: Glycosyl transferase, group 1; KEGG: sjp:SJA_C1-34800 putative glycosyltransferase.
  
  
 0.828
AEG49849.1
PFAM: Bacterial sugar transferase; KEGG: sjp:SJA_C1-34810 putative undecaprenyl-phosphate galactosephosphotransferase.
       0.782
AEG49853.1
PFAM: Polysaccharide biosynthesis protein; KEGG: sjp:SJA_C1-34850 putative polysaccharide transporter.
 
     0.545
AEG49860.1
PFAM: Glycosyl transferase, group 1; KEGG: sjp:SJA_C1-34890 putative glycosyltransferase.
 
  
 0.541
AEG49845.1
PFAM: Sulfotransferase; KEGG: sjp:SJA_C1-34770 putative sulfotransferase protein.
 
    0.526
AEG49852.1
Two component transcriptional regulator, LuxR family; KEGG: sjp:SJA_C1-34840 CheY-like response regulator; PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver region; SMART: Transcription regulator LuxR, C-terminal.
 
   
 0.510
AEG49838.1
PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; KEGG: sjp:SJA_C1-34700 putative carbamoyl-phosphate synthase large subunit.
 
     0.509
AEG49842.1
PFAM: Glycosyl transferase, group 1; KEGG: sjp:SJA_C1-34740 putative glycosyltransferase.
 
  
 0.499
AEG49847.1
PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: sjp:SJA_C1-34790 putative nucleotide sugar epimerase/dehydratase.
 
   
 0.494
Your Current Organism:
Sphingobium chlorophenolicum
NCBI taxonomy Id: 690566
Other names: FLAVOBACTERIUM SP. (STRAIN ATCC 39723), Flavobacterium sp. (ATCC 39723), Flavobacterium sp. ATCC 39723, S. chlorophenolicum L-1, Sphingobium chlorophenolicum ATCC 39723, Sphingobium chlorophenolicum L-1, Sphingobium chlorophenolicum str. L-1, Sphingobium chlorophenolicum strain L-1
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