Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEG50123.1PFAM: Mechanosensitive ion channel MscS; KEGG: sjp:SJA_C1-06880 small-conductance mechanosensitive channel. (418 aa)    
Predicted Functional Partners:
AEG50124.1
TIGRFAM: Cystathionine beta-lyase, bacterial; KEGG: sjp:SJA_C1-06890 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme.
       0.849
AEG50125.1
3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese-like; KEGG: sjp:SJA_C1-06900 thiosulfate sulfurtransferase; SMART: Rhodanese-like.
       0.849
AEG50464.1
KEGG: sjp:SJA_C1-06790 MarC-family membrane protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related.
 
    0.705
AEG50126.1
KEGG: sjp:SJA_C1-06910 hypothetical protein.
       0.547
queF
NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.
       0.547
AEG50122.1
KEGG: sjp:SJA_C1-06870 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02001; PFAM: Conserved hypothetical protein CHP02001.
       0.441
Your Current Organism:
Sphingobium chlorophenolicum
NCBI taxonomy Id: 690566
Other names: FLAVOBACTERIUM SP. (STRAIN ATCC 39723), Flavobacterium sp. (ATCC 39723), Flavobacterium sp. ATCC 39723, S. chlorophenolicum L-1, Sphingobium chlorophenolicum ATCC 39723, Sphingobium chlorophenolicum L-1, Sphingobium chlorophenolicum str. L-1, Sphingobium chlorophenolicum strain L-1
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