STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG50643.1Hypothetical protein. (69 aa)    
Predicted Functional Partners:
AEG50644.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: sal:Sala_0048 phage integrase.
     
 0.522
AEG47713.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; KEGG: sjp:SJA_C1-08330 PleD related family two-component system response regulator; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted.
  
  
 0.452
AEG49198.1
PFAM: Phosphoribosyltransferase; KEGG: sjp:SJA_C1-26460 putative amidophosphoribosyltransferase.
  
    0.449
AEG50011.1
KEGG: sjp:SJA_C1-01200 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase.
  
    0.447
AEG50201.1
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS fold; KEGG: hch:HCH_03647 signal transduction protein; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS.
  
  
 0.444
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.441
hslV
ATP-dependent protease hslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.
  
  
 0.439
rlmJ
Protein of unknown function DUF519; Specifically methylates the adenine in position 2030 of 23S rRNA.
       0.425
AEG50331.1
PFAM: ABC transporter-like; KEGG: swi:Swit_3493 ABC transporter related; SMART: ATPase, AAA+ type, core.
   
    0.410
AEG50234.1
Levansucrase; KEGG: nar:Saro_1879 levansucrase; PFAM: Glycoside hydrolase, family 68; Belongs to the glycosyl hydrolase 68 family.
   
  
 0.409
Your Current Organism:
Sphingobium chlorophenolicum
NCBI taxonomy Id: 690566
Other names: FLAVOBACTERIUM SP. (STRAIN ATCC 39723), Flavobacterium sp. (ATCC 39723), Flavobacterium sp. ATCC 39723, S. chlorophenolicum L-1, Sphingobium chlorophenolicum ATCC 39723, Sphingobium chlorophenolicum L-1, Sphingobium chlorophenolicum str. L-1, Sphingobium chlorophenolicum strain L-1
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