Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEG50816.1TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: sjp:SJA_C2-00170 ParB-like protein; SMART: ParB-like nuclease; Belongs to the ParB family. (330 aa)    
Predicted Functional Partners:
AEG50806.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: sjp:SJA_C2-05880 chromosome partitioning protein ParA.
 
 
 0.844
AEG48129.1
KEGG: sjp:SJA_C1-13490 ParA-like protein.
 
 
 0.675
AEG49377.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: sjp:SJA_C1-33320 ParA-like protein.
  
 
 0.591
AEG49918.1
PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: sjp:SJA_C1-00270 chromosome partitioning protein ParA.
  
 
 0.591
AEG49881.1
ATPase MipZ; KEGG: sjp:SJA_C1-35260 ParA-like protein; manually curated; PFAM: ATPase MipZ.
  
 
 0.590
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.524
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 0.468
mnmE
tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.
  
  
 0.452
AEG49262.1
PFAM: Protein of unknown function DUF2497; KEGG: sjp:SJA_C1-25080 hypothetical protein.
    
 
 0.444
Your Current Organism:
Sphingobium chlorophenolicum
NCBI taxonomy Id: 690566
Other names: FLAVOBACTERIUM SP. (STRAIN ATCC 39723), Flavobacterium sp. (ATCC 39723), Flavobacterium sp. ATCC 39723, S. chlorophenolicum L-1, Sphingobium chlorophenolicum ATCC 39723, Sphingobium chlorophenolicum L-1, Sphingobium chlorophenolicum str. L-1, Sphingobium chlorophenolicum strain L-1
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