Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AEG50819.1PFAM: Flp/Fap pilin component; KEGG: sjp:SJA_C2-00270 putative pilus assembly protein. (59 aa)    
Predicted Functional Partners:
AEG48052.1
KEGG: sjp:SJA_C1-22550 Flp pilus assembly protein pilin Flp.
     
  0.900
AEG48053.1
PFAM: Flp/Fap pilin component; KEGG: sjp:SJA_C1-22550 Flp pilus assembly protein pilin Flp.
     
  0.900
AEG49007.1
Flp/Fap pilin component; KEGG: sjp:SJA_C1-23960 putative pilin Flp; manually curated; PFAM: Flp/Fap pilin component.
     
  0.900
AEG49008.1
PFAM: Flp/Fap pilin component; KEGG: sjp:SJA_C1-23970 putative pilin Flp.
     
  0.900
AEG50818.1
TadE family protein; PFAM: TadE-like; KEGG: sjp:SJA_C2-00260 TadE-like protein.
       0.781
AEG50817.1
Hypothetical protein.
       0.773
AEG50820.1
PFAM: Protein of unknown function DUF2134, membrane; KEGG: sjp:SJA_C2-00280 hypothetical protein.
       0.562
AEG50821.1
KEGG: sjp:SJA_C2-00300 Flp pilus assembly protein TadD.
       0.562
AEG50822.1
PFAM: Type II secretion system F domain; KEGG: sjp:SJA_C2-00310 Flp pilus assembly protein TadC.
       0.562
AEG50823.1
PFAM: Type II secretion system F domain; KEGG: sjp:SJA_C2-00320 Flp pilus assembly protein TadB.
       0.562
Your Current Organism:
Sphingobium chlorophenolicum
NCBI taxonomy Id: 690566
Other names: FLAVOBACTERIUM SP. (STRAIN ATCC 39723), Flavobacterium sp. (ATCC 39723), Flavobacterium sp. ATCC 39723, S. chlorophenolicum L-1, Sphingobium chlorophenolicum ATCC 39723, Sphingobium chlorophenolicum L-1, Sphingobium chlorophenolicum str. L-1, Sphingobium chlorophenolicum strain L-1
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