STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEG50822.1PFAM: Type II secretion system F domain; KEGG: sjp:SJA_C2-00310 Flp pilus assembly protein TadC. (287 aa)    
Predicted Functional Partners:
AEG50823.1
PFAM: Type II secretion system F domain; KEGG: sjp:SJA_C2-00320 Flp pilus assembly protein TadB.
 
  
 0.989
AEG50827.1
KEGG: sjp:SJA_C2-00360 Flp pilus assembly protein CpaB; TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain.
 
  
 0.983
AEG50825.1
Response regulator receiver protein; KEGG: sjp:SJA_C2-00340 pilus assembly protein CpaE.
 
  
 0.977
AEG50824.1
PFAM: Type II secretion system protein E; KEGG: sjp:SJA_C2-00330 pilus assembly protein CpaF.
 
  
 0.970
AEG50826.1
PFAM: Type II/III secretion system; KEGG: sjp:SJA_C2-00350 Flp pilus assembly protein secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.967
AEG50821.1
KEGG: sjp:SJA_C2-00300 Flp pilus assembly protein TadD.
 
  
 0.956
AEG50820.1
PFAM: Protein of unknown function DUF2134, membrane; KEGG: sjp:SJA_C2-00280 hypothetical protein.
 
  
 0.930
AEG48062.1
PFAM: Type II secretion system F domain; KEGG: sjp:SJA_C1-22460 Flp pilus assembly protein TadB.
 
  
 0.926
AEG49059.1
PFAM: Type II secretion system F domain; KEGG: sjp:SJA_C1-24500 Flp pilus assembly protein TadB.
 
  
 0.925
AEG48054.1
KEGG: sjp:SJA_C1-22540 Flp pilus assembly protein CpaB; TIGRFAM: Pilus assembly, Flp-type CpaB; PFAM: SAF domain.
 
  
 0.884
Your Current Organism:
Sphingobium chlorophenolicum
NCBI taxonomy Id: 690566
Other names: FLAVOBACTERIUM SP. (STRAIN ATCC 39723), Flavobacterium sp. (ATCC 39723), Flavobacterium sp. ATCC 39723, S. chlorophenolicum L-1, Sphingobium chlorophenolicum ATCC 39723, Sphingobium chlorophenolicum L-1, Sphingobium chlorophenolicum str. L-1, Sphingobium chlorophenolicum strain L-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.