STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
guaAGMP synthase; Catalyzes the synthesis of GMP from XMP. (510 aa)    
Predicted Functional Partners:
rplJ
Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.
   
    0.999
rplK
Ribosomal protein L11, bacterial-type; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
  
    0.999
CFX40616.1
Phosphoribosylformylglycinamidine synthase, FGAM.
  
  
 0.999
argS
Arginine-tRNA ligase.
   
  
 0.999
pyrG
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.
  
 0.998
truB
tRNA pseudouridine synthase II, TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
  
 0.992
lysS
Lysine-tRNA ligase, class II; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.990
CFY02422.1
PAS fold.
  
 0.988
CFX98609.1
Hypoxanthine phosphoribosyl transferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
 
 0.987
rplA
Ribosomal protein L1, bacterial-type; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.
   
  
 0.985
Your Current Organism:
Syntrophomonas zehnderi
NCBI taxonomy Id: 690567
Other names: S. zehnderi OL-4, Syntrophomonas zehnderi DSM 17840, Syntrophomonas zehnderi OL-4, Syntrophomonas zehnderi str. OL-4, Syntrophomonas zehnderi strain OL-4
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.