STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000732195_02092Unannotated protein. (96 aa)    
Predicted Functional Partners:
GCA_000732195_02093
Unannotated protein.
 
     0.951
GCA_000732195_02091
Unannotated protein.
       0.623
GCA_000732195_02094
Unannotated protein.
       0.510
GCA_000732195_02194
Unannotated protein.
  
     0.498
Your Current Organism:
Rhizobium vignae
NCBI taxonomy Id: 690585
Other names: CCBAU 05176, HAMBI 3039, LMG 25447, LMG:25447, R. vignae, Rhizobium sp. CCBAU 05176, Rhizobium sp. CCBAU 23084, Rhizobium sp. CCBAU 45071, Rhizobium sp. CCBAU 45111, Rhizobium sp. CCBAU 45248, Rhizobium sp. CCBAU 45252, Rhizobium sp. CCBAU 83006, Rhizobium vignae Ren et al. 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.