STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000732195_02997Unannotated protein. (271 aa)    
Predicted Functional Partners:
GCA_000732195_00198
Unannotated protein.
 0.999
GCA_000732195_00581
Unannotated protein.
 0.999
GCA_000732195_02998
Unannotated protein.
 
 0.999
GCA_000732195_04969
Unannotated protein.
 
 0.999
GCA_000732195_04970
Unannotated protein.
 
 0.999
GCA_000732195_04971
Unannotated protein.
 
 
 0.994
GCA_000732195_02996
Unannotated protein.
     
 0.857
GCA_000732195_04011
Unannotated protein.
 
 
 0.837
GCA_000732195_04992
Unannotated protein.
 
 
 0.835
GCA_000732195_02995
Unannotated protein.
     
 0.828
Your Current Organism:
Rhizobium vignae
NCBI taxonomy Id: 690585
Other names: CCBAU 05176, HAMBI 3039, LMG 25447, LMG:25447, R. vignae, Rhizobium sp. CCBAU 05176, Rhizobium sp. CCBAU 23084, Rhizobium sp. CCBAU 45071, Rhizobium sp. CCBAU 45111, Rhizobium sp. CCBAU 45248, Rhizobium sp. CCBAU 45252, Rhizobium sp. CCBAU 83006, Rhizobium vignae Ren et al. 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.