STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000732195_03897Unannotated protein. (294 aa)    
Predicted Functional Partners:
GCA_000732195_03222
Unannotated protein.
  
 0.883
GCA_000732195_02299
Unannotated protein.
  
 0.818
GCA_000732195_05150
Unannotated protein.
  
 0.818
GCA_000732195_04579
Unannotated protein.
  
 0.678
GCA_000732195_00151
Unannotated protein.
  
 0.671
GCA_000732195_00152
Unannotated protein.
  
 0.671
GCA_000732195_00640
Unannotated protein.
  
 0.671
GCA_000732195_02109
Unannotated protein.
    
  0.671
GCA_000732195_02412
Unannotated protein.
    
  0.660
GCA_000732195_00136
Unannotated protein.
     
 0.648
Your Current Organism:
Rhizobium vignae
NCBI taxonomy Id: 690585
Other names: CCBAU 05176, HAMBI 3039, LMG 25447, LMG:25447, R. vignae, Rhizobium sp. CCBAU 05176, Rhizobium sp. CCBAU 23084, Rhizobium sp. CCBAU 45071, Rhizobium sp. CCBAU 45111, Rhizobium sp. CCBAU 45248, Rhizobium sp. CCBAU 45252, Rhizobium sp. CCBAU 83006, Rhizobium vignae Ren et al. 2011
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.