STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_0020PFAM: Glycosyl transferase, group 1; KEGG: dde:Dde_1656 glycosyl transferase, group 1 family protein. (376 aa)    
Predicted Functional Partners:
Desaf_0021
PFAM: Glycosyl transferase, group 1; KEGG: bpt:Bpet0184 glycosyltransferase.
    
0.839
Desaf_2436
PFAM: Glycosyl transferase, group 1; KEGG: drt:Dret_2032 glycosyl transferase group 1.
  
     0.769
Desaf_2901
PFAM: Glycosyl transferase, family 9; KEGG: dvm:DvMF_3035 glycosyl transferase family 9.
 
  
 0.579
Desaf_1143
KEGG: dba:Dbac_3291 undecaprenyl-phosphate glucose phosphotransferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase, WcaJ; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase.
  
  
 0.570
Desaf_0022
PFAM: Glycosyl transferase, family 2; KEGG: gau:GAU_0664 putative glycosyltransferase.
  
  
 0.553
Desaf_0019
PFAM: Mitochondrial inner membrane translocase complex, subunit Tim44-related; KEGG: dds:Ddes_1736 import inner membrane translocase subunit Tim44.
 
     0.551
Desaf_0023
PFAM: Polysaccharide deacetylase; KEGG: hau:Haur_1595 polysaccharide deacetylase.
  
  
 0.543
Desaf_2725
TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: dba:Dbac_1843 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal.
 
  
 0.503
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.484
Desaf_0790
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: iron-sulfur-binding protein.
  
     0.469
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.