STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_0182TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: cyc:PCC7424_1933 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: ATPase, P-type, ATPase-associated region; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal. (910 aa)    
Predicted Functional Partners:
Desaf_0949
PFAM: MgtC/SapB transporter; KEGG: psm:PSM_A1419 transporter.
  
 
 0.616
Desaf_2506
KEGG: pfo:Pfl01_4199 signal transduction protein; PFAM: EF-Hand domain; SMART: Calcium-binding EF-hand.
   
 
 0.541
Desaf_3374
KEGG: rme:Rmet_3380 signal transduction protein.
   
 
 0.541
Desaf_0181
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: dvm:DvMF_1366 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
       0.518
Desaf_0531
KEGG: aco:Amico_1244 beta-phosphoglucomutase family hydrolase; TIGRFAM: Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase.
  
 
 0.499
Desaf_1848
KEGG: sat:SYN_00323 M50 family membrane endopeptidase; PFAM: Peptidase M50; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; Belongs to the peptidase M50B family.
 
 
 0.483
Desaf_1407
Furin; KEGG: scm:SCHCODRAFT_65424 hypothetical protein; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Proprotein convertase, P.
   
 0.453
Desaf_3575
KEGG: swo:Swol_2253 subtilisin-like serine protease.
   
 0.453
Desaf_2181
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
  
 0.425
Desaf_1333
PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Phospholipid/glycerol acyltransferase; KEGG: nhl:Nhal_3081 AMP-dependent synthetase and ligase; SMART: Phospholipid/glycerol acyltransferase.
  
 0.424
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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