STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_0317PFAM: ROSMUCR transcriptional regulator; KEGG: dvl:Dvul_0717 MucR family transcriptional regulator. (140 aa)    
Predicted Functional Partners:
Desaf_0316
Hypothetical protein.
       0.773
Desaf_3692
PFAM: Protein of unknown function DUF490; KEGG: dma:DMR_35520 hypothetical protein.
  
     0.725
Desaf_3691
PFAM: Bacterial surface antigen (D15); KEGG: drt:Dret_0433 surface antigen (D15).
  
     0.683
Desaf_2102
MJ0042 family finger-like protein; TIGRFAM: Zinc finger/thioredoxin putative; KEGG: dsa:Desal_3657 MJ0042 family finger-like protein.
  
     0.641
Desaf_2127
KEGG: hypothetical protein.
  
     0.634
Desaf_2299
KEGG: dma:DMR_38940 hypothetical protein.
  
     0.607
Desaf_1732
KEGG: dsa:Desal_2632 hypothetical protein.
  
     0.558
Desaf_1733
KEGG: dde:Dde_2592 hypothetical protein.
  
     0.557
Desaf_2253
KEGG: dsa:Desal_1802 Smr protein/MutS2; PFAM: Smr protein/MutS2 C-terminal; SMART: Smr protein/MutS2 C-terminal.
  
     0.505
Desaf_3012
PFAM: Permease YjgP/YjgQ, predicted; KEGG: dde:Dde_1949 permease.
  
     0.503
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.