STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_0699PFAM: Tail tube protein, bacteriophage; KEGG: tail tube protein, bacteriophage. (116 aa)    
Predicted Functional Partners:
Desaf_0698
KEGG: bacteriophage Mu tail sheath.
  
  
 0.881
Desaf_0700
PFAM: Mu-like prophage FluMu protein gp41; KEGG: Mu-like prophage FluMu protein GP41.
       0.793
Desaf_0695
KEGG: phage virion morphogenesis protein; TIGRFAM: Phage virion morphogenesis (putative tail completion) protein; PFAM: Phage virion morphogenesis (putative tail completion) protein.
  
    0.737
Desaf_0693
PFAM: Protein of unknown function DUF1320; KEGG: hypothetical protein.
       0.733
Desaf_0696
KEGG: hypothetical protein.
       0.733
Desaf_0692
KEGG: mag:amb1769 hypothetical protein.
       0.708
Desaf_0694
Hypothetical protein.
       0.708
Desaf_0697
Hypothetical protein.
       0.708
Desaf_0691
PFAM: Mu-like major head subunit gpT, prophage; KEGG: pag:PLES_15811 putative major head subunit protein.
       0.625
Desaf_1921
KEGG: dvu:DVU2860 hypothetical protein.
  
    0.625
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.