STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_0813PFAM: Glutamine cyclotransferase; KEGG: ccs:CCNA_02733 glutaminyl-peptide cyclotransferase. (249 aa)    
Predicted Functional Partners:
Desaf_1252
KEGG: sti:Sthe_2525 FAD linked oxidase domain protein; PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like.
    
   0.497
Desaf_1603
D-lactate dehydrogenase (cytochrome); KEGG: dvu:DVU0827 glycolate oxidase, subunit GlcD, putative; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal.
    
   0.497
Desaf_1803
TIGRFAM: FAD-linked oxidoreductase; KEGG: nmg:Nmag_3910 FAD-linked oxidoreductase; PFAM: D-arabinono-1,4-lactone oxidase; FAD linked oxidase, N-terminal.
    
   0.497
Desaf_2183
D-lactate dehydrogenase (cytochrome); KEGG: FAD linked oxidase domain-containing protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal.
    
   0.497
Desaf_2275
PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; KEGG: dma:DMR_33110 putative FAD linked oxidase.
    
   0.497
Desaf_3657
D-lactate dehydrogenase (cytochrome); KEGG: dvu:DVU0390 glycolate oxidase, subunit GlcD, putative; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal.
    
   0.497
Desaf_0814
KEGG: hypothetical protein.
       0.431
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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