STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_1069KEGG: dvm:DvMF_1394 hypothetical protein. (236 aa)    
Predicted Functional Partners:
Desaf_1068
TIGRFAM: Flagellar export FliJ; KEGG: dsa:Desal_0244 flagellar export protein FliJ.
  
  
 0.974
Desaf_1836
PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: dsa:Desal_1151 flagellar assembly protein FliH, putative.
 
    0.965
Desaf_2402
PFAM: Flagellar hook-length control protein; KEGG: dvl:Dvul_1634 flagellar hook-length control protein.
 
  
 0.965
Desaf_1178
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
 
 0.951
Desaf_1838
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.948
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.945
Desaf_1177
KEGG: flagellar motor switch protein FliM; TIGRFAM: Flagellar motor switch protein FliM; PFAM: Flagellar motor switch protein FliM; Surface presentation of antigen (SpoA).
 
  
 0.937
Desaf_1841
TIGRFAM: Flagellar basal-body rod protein FlgB; KEGG: flagellar basal-body rod protein FlgB.
 
  
 0.934
Desaf_1837
KEGG: dsa:Desal_1152 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; Magnesium transporter, MgtE intracellular region.
 
  
 0.932
Desaf_1840
KEGG: dvl:Dvul_2666 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family.
  
  
 0.926
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.