STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_1311PFAM: Methyltransferase type 12; KEGG: bxe:Bxe_A3033 hypothetical protein. (357 aa)    
Predicted Functional Partners:
Desaf_0760
PFAM: Glycosyl transferase, family 2; KEGG: bcm:Bcenmc03_0852 glycosyl transferase family protein.
  
 0.762
Desaf_1955
Hypothetical protein; Manually curated; KEGG: rxy:Rxyl_0488 kinase-like protein.
   
   0.668
Desaf_0761
KEGG: mem:Memar_0194 hypothetical protein.
 
      0.636
Desaf_1008
PFAM: Glycosyl transferase, family 2; KEGG: dma:DMR_14840 putative glycosyltransferase.
 
  
 0.527
Desaf_1312
Hypothetical protein.
       0.513
Desaf_0098
KEGG: bra:BRADO2078 TPR repeat-containing protein.
 
  
 0.401
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.