STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_1327PFAM: MotA/TolQ/ExbB proton channel; KEGG: dma:DMR_16230 chemotaxis protein MotA. (274 aa)    
Predicted Functional Partners:
Desaf_1326
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dsa:Desal_0027 OmpA/MotB domain protein.
 
 0.997
Desaf_1180
KEGG: dsa:Desal_3812 OmpA/MotB domain protein; manually curated; PFAM: Outer membrane protein, OmpA/MotB, C-terminal.
 
 0.990
Desaf_2983
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dsa:Desal_3352 OmpA/MotB domain protein.
 
 0.990
Desaf_1179
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: dsa:Desal_3813 OmpA/MotB domain protein.
 
 0.989
Desaf_2268
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: OmpA/MotB domain-containing protein.
 
 0.988
Desaf_1837
KEGG: dsa:Desal_1152 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG; Magnesium transporter, MgtE intracellular region.
 
  
 0.945
Desaf_1840
KEGG: dvl:Dvul_2666 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal; Flagellar basal body rod protein, N-terminal; Belongs to the flagella basal body rod proteins family.
 
  
 0.942
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
  
 0.939
Desaf_1176
KEGG: dma:DMR_46180 flagellar motor switch protein FliN; TIGRFAM: Flagellar motor switch FliN; PFAM: Surface presentation of antigen (SpoA).
 
  
 0.937
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.936
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.