STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_1647PFAM: CheC-like protein; KEGG: dsa:Desal_3019 chemotaxis protein CheX, putative. (154 aa)    
Predicted Functional Partners:
Desaf_0241
KEGG: dde:Dde_0384 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
 
 
 0.960
Desaf_0124
Response regulator receiver protein; KEGG: lip:LI0526 CheY-like receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
 
 
 0.958
Desaf_0018
Response regulator receiver protein; KEGG: dma:DMR_16140 putative chemotaxis protein CheY; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
   
 
  0.932
Desaf_0576
Response regulator receiver protein; KEGG: dma:DMR_02840 putative chemotaxis protein CheY; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
   
 
  0.907
Desaf_1420
KEGG: dma:DMR_07010 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
   
 
  0.907
Desaf_1651
KEGG: dsa:Desal_2178 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
   
 
  0.907
Desaf_0796
KEGG: dde:Dde_1196 chemotaxis protein CheX.
  
  
 
0.906
Desaf_3047
KEGG: dde:Dde_2107 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
   
 
  0.905
Desaf_3154
KEGG: dvm:DvMF_0775 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
   
 
  0.905
Desaf_1645
Hypothetical protein.
       0.723
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.