STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_1748KEGG: dba:Dbac_0217 hydroxylamine oxidase. (526 aa)    
Predicted Functional Partners:
Desaf_1048
KEGG: sfu:Sfum_2398 nitrite reductase (cytochrome; ammonia-forming); PFAM: Cytochrome c552; Belongs to the cytochrome c-552 family.
  
 0.977
Desaf_0946
KEGG: sse:Ssed_3758 hypothetical protein.
  
  
 
0.929
Desaf_1465
PFAM: Nitrate reductase, gamma subunit; KEGG: dsa:Desal_0186 nitrate reductase gamma subunit.
  
  
 0.918
Desaf_1049
KEGG: dma:DMR_06510 cytochrome c nitrite reductase small subunit; TIGRFAM: Cytochrome c nitrate reductase, small subunit; PFAM: NapC/NirT cytochrome c, N-terminal.
    
 0.915
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.910
hcp-2
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
    
 0.910
Desaf_3076
Nitrite reductase (NAD(P)H); KEGG: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
     
 0.902
Desaf_2833
KEGG: dba:Dbac_2248 2-nitropropane dioxygenase NPD; manually curated; PFAM: 2-nitropropane dioxygenase, NPD.
     
  0.900
Desaf_1747
PFAM: Protein of unknown function DUF2254, membrane; KEGG: cyj:Cyan7822_6085 hypothetical protein.
       0.773
Desaf_3272
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dbr:Deba_2117 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.745
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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