close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_2139PFAM: Nickel-dependent hydrogenase, large subunit; KEGG: hut:Huta_2605 nickel-dependent hydrogenase large subunit. (460 aa)    
Predicted Functional Partners:
Desaf_2138
PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: hut:Huta_2604 NADH ubiquinone oxidoreductase 20 kDa subunit.
 
 0.997
Desaf_2136
KEGG: dly:Dehly_0927 response regulator receiver protein.
 
  
 0.988
Desaf_2877
Dihydroorotate dehydrogenase, electron transfer subunit protein; KEGG: dba:Dbac_0854 oxidoreductase FAD/NAD(P)-binding domain protein; iron-sulfur cluster binding domain-containing protein; PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase FAD-binding region.
 
  
 0.973
Desaf_1385
PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; KEGG: dat:HRM2_11730 MvhG.
 
 
 0.941
Desaf_1489
Nitrate reductase; KEGG: dde:Dde_0682 hypothetical protein; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.906
Desaf_1628
Nitrate reductase; KEGG: dba:Dbac_2860 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.906
Desaf_3550
Nitrate reductase; KEGG: dba:Dbac_0171 molybdopterin oxidoreductase; PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
 0.906
Desaf_0967
PFAM: Nitrite/sulphite reductase 4Fe-4S region; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: dat:HRM2_45080 putative dissimilatory sulfite reductase.
     
  0.900
Desaf_1274
TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; KEGG: dma:DMR_17120 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
  0.900
Desaf_1370
TIGRFAM: Sulphite reductase, dissimilatory-type alpha subunit; KEGG: dvl:Dvul_2532 sulfite reductase, dissimilatory-type alpha subunit; PFAM: Nitrite/sulphite reductase 4Fe-4S region.
     
  0.900
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.