STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_2161Thioredoxin domain-containing protein; PFAM: Thioredoxin domain; KEGG: dol:Dole_2886 thioredoxin domain-containing protein. (150 aa)    
Predicted Functional Partners:
msrB
KEGG: sat:SYN_01261 peptide methionine sulfoxide reductase; manually curated; TIGRFAM: Methionine sulphoxide reductase B; PFAM: Methionine sulphoxide reductase B; HAMAP: Peptide methionine sulfoxide reductase msrB.
   
 0.949
Desaf_2159
PFAM: Cytochrome c assembly protein, transmembrane region; KEGG: cytochrome c biogenesis protein transmembrane region.
 
 
 0.912
Desaf_2162
KEGG: hypothetical protein.
  
 
 0.726
Desaf_0950
Peroxiredoxin; KEGG: dvm:DvMF_0219 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 0.686
Desaf_1815
Peroxiredoxin; Contains selenocysteine; manually curated; KEGG: putative peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal.
  
 0.686
Desaf_0311
Thioredoxin; KEGG: dia:Dtpsy_0520 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain.
 
  
 0.678
msrA
Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
   
 0.675
Desaf_2443
KEGG: hypothetical protein.
  
 
 0.672
Desaf_2915
Protein-disulfide reductase; KEGG: dsa:Desal_1321 cytochrome c biogenesis protein transmembrane region; PFAM: Cytochrome c assembly protein, transmembrane region.
  
 
 0.671
Desaf_2160
PFAM: Protein of unknown function DUF318, transmembrane; KEGG: permease.
 
  
 0.662
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.