STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_2265KEGG: dde:Dde_2398 hypothetical protein. (192 aa)    
Predicted Functional Partners:
Desaf_1836
PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: dsa:Desal_1151 flagellar assembly protein FliH, putative.
  
     0.585
Desaf_1224
KEGG: rhodanese domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like.
  
     0.556
Desaf_1050
KEGG: dvm:DvMF_1219 transposase, putative.
  
     0.526
Desaf_2402
PFAM: Flagellar hook-length control protein; KEGG: dvl:Dvul_1634 flagellar hook-length control protein.
  
     0.509
Desaf_2264
Hypothetical protein.
       0.488
Desaf_2266
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.486
Desaf_3039
KEGG: dvl:Dvul_1436 tetratricopeptide domain-containing protein.
 
     0.478
Desaf_3755
KEGG: tetratricopeptide domain-containing protein.
  
     0.429
Desaf_2538
KEGG: dvm:DvMF_2676 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3.
  
     0.421
Desaf_1635
PFAM: Glycosyl transferase, group 1; KEGG: hypothetical protein.
 
     0.417
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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