STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_2480PFAM: Domain of unknown function DUF2382, C-terminal; KEGG: sli:Slin_2858 hypothetical protein. (144 aa)    
Predicted Functional Partners:
Desaf_2479
PFAM: Domain of unknown function DUF2382, C-terminal; KEGG: sus:Acid_7532 hypothetical protein.
     0.962
Desaf_0880
KEGG: sti:Sthe_2408 hypothetical protein.
 
     0.713
Desaf_1189
KEGG: tra:Trad_2746 hypothetical protein.
 
     0.696
Desaf_1355
KEGG: geo:Geob_3246 hypothetical protein.
  
     0.667
Desaf_0878
KEGG: azl:AZL_c04230 hypothetical protein.
 
    0.661
Desaf_1359
PFAM: Methyltransferase type 12; KEGG: geo:Geob_3248 methyltransferase type 11.
 
  
 0.655
Desaf_1354
KEGG: rce:RC1_0530 hypothetical protein.
  
     0.652
Desaf_1357
KEGG: pzu:PHZ_c2092 hypothetical protein.
  
     0.652
Desaf_1356
KEGG: rce:RC1_0532 hypothetical protein.
  
     0.644
Desaf_2987
PFAM: ABC-type glycine betaine transport system, substrate-binding region; KEGG: sta:STHERM_c17930 transporter.
  
    0.632
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.