STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_2490KEGG: dvl:Dvul_1622 thioredoxin-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase. (303 aa)    
Predicted Functional Partners:
Desaf_3114
Thioredoxin; KEGG: drt:Dret_1908 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
 
 0.978
Desaf_3113
KEGG: dvl:Dvul_1324 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 
0.924
Desaf_2502
KEGG: dvu:DVU0283 AhpF family protein/thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
  
 
0.921
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.912
Desaf_0950
Peroxiredoxin; KEGG: dvm:DvMF_0219 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen.
  
 
 0.833
Desaf_1815
Peroxiredoxin; Contains selenocysteine; manually curated; KEGG: putative peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal.
  
 
 0.833
Desaf_1276
Fe-S cluster assembly protein NifU; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.
  
  
 0.779
Desaf_0311
Thioredoxin; KEGG: dia:Dtpsy_0520 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain.
  
 
 0.762
Desaf_1711
PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: UBA/ThiF-type NAD/FAD-binding protein.
  
  
 0.636
cysS
TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: dsa:Desal_3356 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.610
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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