STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_3075PFAM: Glutamine amidotransferase, class-II; KEGG: dde:Dde_1815 glutamate synthase (NADPH) GltB1 subunit. (364 aa)    
Predicted Functional Partners:
Desaf_3074
PFAM: Glutamate synthase, alpha subunit, C-terminal; KEGG: dde:Dde_1816 glutamate synthase (NADPH) GltB3 subunit.
   0.998
Desaf_3078
KEGG: dvl:Dvul_1337 glutamate synthase (NADPH); PFAM: Glutamate synthase, central-C; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Belongs to the glutamate synthase family.
 
 
 0.976
Desaf_3067
KEGG: dba:Dbac_1640 glutamate synthase (ferredoxin); PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
  
 
0.935
Desaf_3076
Nitrite reductase (NAD(P)H); KEGG: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
  
 0.914
rnfB
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.890
Desaf_1805
TIGRFAM: Glutamate synthase (NADPH), homotetrameric; KEGG: dvl:Dvul_0766 putative oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.888
rnfB-2
Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.
 
 
 0.887
Desaf_2454
KEGG: dvl:Dvul_1521 putative glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
 
 
 0.886
Desaf_0412
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Cysteine-rich region, CCG; KEGG: dae:Dtox_3439 protein of unknown function DUF224 cysteine-rich region domain protein.
  
 
 0.877
Desaf_3077
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: 4Fe-4S ferredoxin iron-sulfur-binding domain-containing protein.
 
    0.821
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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