STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_3559KEGG: spe:Spro_4959 hypothetical protein. (128 aa)    
Predicted Functional Partners:
Desaf_3558
GPW/gp25 family protein; PFAM: GPW/gp25; KEGG: dbr:Deba_1575 gpW/GP25 family protein.
  
 
 0.990
Desaf_3563
PFAM: Phage tail protein X; KEGG: dbr:Deba_1579 putative phage tail protein gpX.
  
 
 0.979
Desaf_3557
PFAM: Baseplate assembly protein J-like, predicted; KEGG: aco:Amico_1104 baseplate J family protein.
  
 
 0.972
Desaf_3556
KEGG: drm:Dred_1221 hypothetical protein; TIGRFAM: Phage tail protein I; PFAM: Phage tail protein I.
  
 
 0.969
Desaf_3567
KEGG: dbr:Deba_1584 hypothetical protein.
  
 
 0.969
Desaf_3566
PFAM: Phage major tail tube protein; KEGG: spe:Spro_4913 major tail tube protein.
  
   0.965
Desaf_3562
PFAM: Phage late control D; KEGG: aco:Amico_1109 late control D family protein.
  
  
 0.944
Desaf_3561
KEGG: aco:Amico_1108 phage baseplate assembly protein V; TIGRFAM: Phage-related baseplate assembly protein V; PFAM: Phage baseplate assembly protein V.
  
  
 0.938
Desaf_3555
PFAM: Phage Tail Collar; KEGG: pna:Pnap_3306 phage tail collar domain-containing protein.
  
  
 0.911
Desaf_3535
PFAM: Baseplate assembly protein J-like, predicted; KEGG: aco:Amico_1104 baseplate J family protein.
  
 
 0.884
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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