STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Desaf_3587PFAM: Protein of unknown function DUF533; KEGG: pag:PLES_12701 hypothetical protein. (230 aa)    
Predicted Functional Partners:
htpX
Protease htpX; KEGG: dvm:DvMF_0946 peptidase M48 Ste24p; HAMAP: protease htpX; PFAM: Peptidase M48, Ste24p; Belongs to the peptidase M48B family.
   
    0.578
Desaf_2578
KEGG: sun:SUN_2375 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase.
  
     0.533
Desaf_3603
KEGG: tra:Trad_0906 glucose sorbosone dehydrogenase.
  
    0.448
Desaf_0162
KEGG: dba:Dbac_1014 zinc resistance-associated protein.
   
  
 0.418
Desaf_2367
KEGG: dvm:DvMF_2147 zinc resistance-associated protein.
   
  
 0.418
Desaf_2477
KEGG: dba:Dbac_2945 hypothetical protein.
   
  
 0.418
Your Current Organism:
Desulfocurvibacter africanus
NCBI taxonomy Id: 690850
Other names: D. africanus subsp. africanus str. Walvis Bay, Desulfocurvibacter africanus str. Walvis Bay, Desulfocurvibacter africanus subsp. africanus str. Walvis Bay, Desulfovibrio africanus ATCC 19997, Desulfovibrio africanus str. Walvis Bay, Desulfovibrio africanus strain Walvis Bay
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.